An in vitro Method of Evaluating DICER1 Mutations

MK Wu1, MR Fabian2, and WD Foulkes1,3,4

1. Dept. of Medical Genetics, Lady Davis Institute Jewish General Hospital, McGill University, Montréal, QC, Canada; 2. Depts. of Oncology and Experimental Medicine, McGill University, Montréal, QC, Canada; 3. Research Institute of the McGill University Health Centre, Montréal, QC, Canada; 4. Program in Cancer Genetics, Depts. of Oncology and Human Genetics, McGill University, Montréal, QC, Canada

DICER1 is an endoribonuclease central to the generation of microRNAs (miRNAs), small RNA molecules that are predicted to silence the expression of ~30% of protein-coding genes. DICER1 utilizes its RNAse IIIa and IIIb endonuclease domains to cleave premature miRNA stemloops in order to release the mature single-strand miRNA, which can be coded within either the 5’ (5p) or 3’ (3p) arms of the stemloop structure. The RNAse IIIa domain cleaves the 3p arm of pre-miRNAs whereas the RNAse IIIb domain catalyzes the cleavage of the 5p arm. Germ-line mutations in DICER1 have been identified in patients afflicted with pleiotropic tumour predisposition syndrome whose tumours and lesions include: pleuropulmonary blastoma, cystic nephroma, ovarian Sertoli-Leydig cell tumour, thyroid non-toxic goiter/cyst, Wilms tumour, pituitary blastoma, pineoblastoma, intraocular medulloepithelioma, medulloblastoma/infratentorial primitive neuroectodermal tumour, and seminomas.  The majority of families with pleiotropic tumour predisposition syndrome have frameshift or nonsense mutations in DICER1 while their tumours/lesions bear additional missense mutations in the RNAse IIIb domain. The genetic events with respect to DICER1 syndrome appear to follow a variation of Knudson’s two-hit hypothesis for tumour formation, where one allele is inactivated and the other allele bears a mutation in the RNAse IIIb domain should they occur in susceptible cell type at the right period during development. A robust assay to evaluate the consequences of DICER1 mutations on miRNA production has not been generated. Here I present the results of our DICER in vitro cleavage assay. These results may prove informative for predicting the consequences of DICER1 mutations on miRNA generation.